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1. USING BRAT

USING BRAT 1 1 20 1 UPDATES In version 1 1 20 we slightly changed the output format for acgt count with option B Please see Output format for ACGT count In addition we made changes to User Manual section How to use BRAT with reads sequenced from four strands Please notice BRAT counts correctly ACGT for the case when two original strands are sequenced but for the case when four PCR product strands are sequenced there might be a bias in counting ACGT for unmethylated cytoci
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